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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T TOM1 chr22:35695268-35743987:+ 0.83 8.69 6.03E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T TOMM22 chr22:39077953-39081426:+ 0.88 10.3 1.36E-22 Box Plot
THCA rs5998366 chr22:32665525 C/T TOP3B chr22:22311397-22337213:- 0.6 7.71 7.57E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T TRABD chr22:50624344-50638027:+ 0.67 8.16 3.1E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T TRMT2A chr22:20099389-20104915:- 0.66 8.43 4.07E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T TRMU chr22:46726772-46753237:+ 0.57 8.05 6.49E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T TTLL1 chr22:43435650-43485434:- 0.62 6.48 2.31E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T TUBGCP6 chr22:50656118-50683421:- 0.66 9.78 1.01E-20 Box Plot
THCA rs5998366 chr22:32665525 C/T TUG1 chr22:31366663-31375381:+ 0.75 8.82 2.2E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T TXN2 chr22:36863083-36878077:- 0.8 10.34 9.65E-23 Box Plot
THCA rs5998366 chr22:32665525 C/T UBE2L3 chr22:21903736-21978323:+ 0.78 9.24 8.37E-19 Box Plot
THCA rs5998366 chr22:32665525 C/T UFD1L chr22:19437433-19466738:- 0.78 9.24 8.19E-19 Box Plot
THCA rs5998366 chr22:32665525 C/T UQCR10 chr22:30163358-30166402:+ 0.59 9.06 3.48E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T XBP1 chr22:29190543-29196585:- 0.51 6.06 2.73E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T XPNPEP3 chr22:41253081-41328819:+ 0.58 6.14 1.75E-9 Box Plot